TY - JOUR
T1 - A modern era of personalized medicine in the diagnosis, prognosis, and treatment of prostate cancer
AU - Lakshmanan, Vinoth Kumar
AU - Ojha, Shreesh
AU - Jung, Young Do
N1 - Funding Information:
The authors thank the Biomedical Research Institute, Chonnam National University Hospital Hakdong campus, Chonnam National University Medical School. The present study was financially supported by a grant ( 2018R1D1A1B07049918 ) of the National Research Foundation of Korea (NRF) funded by the Ministry of Education, Science, and Technology .
Funding Information:
The authors thank the Biomedical Research Institute, Chonnam National University Hospital Hakdong campus, Chonnam National University Medical School. The present study was financially supported by a grant (2018R1D1A1B07049918) of the National Research Foundation of Korea (NRF) funded by the Ministry of Education, Science, and Technology.
Publisher Copyright:
© 2020 Elsevier Ltd
PY - 2020/11
Y1 - 2020/11
N2 - The present era is witnessing rapid advancements in the field of medical informatics and modern healthcare management. The role of translational bioinformatics (TBI), an infant discipline in the field of medical informatics, is pivotal in this revolution. The development of high-throughput technologies [e.g., microarrays, next-generation sequencing (NGS)] has propelled TBI to the next stage in this modern era of medical informatics. In this review, we assess the promising translational outcomes of microarray- and NGS-based discovery of genes, proteins, micro RNAs, and other active biological compounds aiding in the diagnosis, prognosis, and therapy of prostate cancer (PCa) to improve treatment strategies at the localized and/or metastatic stages in patients. Several promising candidate biomarkers in circulating blood (miR-25–3p and miR-18b-5p), urine (miR-95, miR-21, miR-19a, and miR-19b), and prostatic secretions (miR-203) have been identified. AURKA and MYCN, novel candidate biomarkers, were found to be specifically expressed in neuroendocrine PCa. The use of BTNL2 gene mutations and inflammasomes as biomarkers in immune function-mediated, inherited PCa has also been elucidated based on NGS data. Although TBI discoveries can benefit clinical performance metrics, the translational potential and the in vivo performance of TBI outcomes need to be verified. In conclusion, TBI aids in the effective clinical management of PCa; furthermore, the fate of personalized/precision medicine mostly relies on the enhanced diagnostic, prognostic, and therapeutic potential of TBI.
AB - The present era is witnessing rapid advancements in the field of medical informatics and modern healthcare management. The role of translational bioinformatics (TBI), an infant discipline in the field of medical informatics, is pivotal in this revolution. The development of high-throughput technologies [e.g., microarrays, next-generation sequencing (NGS)] has propelled TBI to the next stage in this modern era of medical informatics. In this review, we assess the promising translational outcomes of microarray- and NGS-based discovery of genes, proteins, micro RNAs, and other active biological compounds aiding in the diagnosis, prognosis, and therapy of prostate cancer (PCa) to improve treatment strategies at the localized and/or metastatic stages in patients. Several promising candidate biomarkers in circulating blood (miR-25–3p and miR-18b-5p), urine (miR-95, miR-21, miR-19a, and miR-19b), and prostatic secretions (miR-203) have been identified. AURKA and MYCN, novel candidate biomarkers, were found to be specifically expressed in neuroendocrine PCa. The use of BTNL2 gene mutations and inflammasomes as biomarkers in immune function-mediated, inherited PCa has also been elucidated based on NGS data. Although TBI discoveries can benefit clinical performance metrics, the translational potential and the in vivo performance of TBI outcomes need to be verified. In conclusion, TBI aids in the effective clinical management of PCa; furthermore, the fate of personalized/precision medicine mostly relies on the enhanced diagnostic, prognostic, and therapeutic potential of TBI.
KW - Drug design
KW - Microarray
KW - Next-generation sequencing
KW - Prostate cancer
KW - Translational bioinformatics
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U2 - 10.1016/j.compbiomed.2020.104020
DO - 10.1016/j.compbiomed.2020.104020
M3 - Review article
C2 - 33039808
AN - SCOPUS:85092320047
SN - 0010-4825
VL - 126
JO - Computers in Biology and Medicine
JF - Computers in Biology and Medicine
M1 - 104020
ER -