A web services based framework for uniform integration of command-line bioinformatics software tools

Elarbi Badidi; Larbi Esmahi; M. Adel Serhani; Salah Bouktif

doi:10.1109/INNOVATIONS.2008.4781764

A web services based framework for uniform integration of command-line bioinformatics software tools

Elarbi Badidi, Larbi Esmahi, M. Adel Serhani, Salah Bouktif

Department of Intelligent Systems

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

1 Citation (Scopus)

Abstract

Life scientists use a variety of bioinformatics tools to perform tasks such as annotation of and protein sequences. Most of these tools areline driven and handle various data types (nucleotide, protein, etc.) and data formats (Fasta, , etc.). As many bioinformatics software tools generally involved in analysis tasks, scientists are and more requiring that these heterogeneous tools be integrated in a uniform way. re also requiring graphical user interfaces of tools, and the ability to compose workflows much programming effort. IElarbin this paper, propose a Web services based framework that meets the above requirements.

Original language	English
Title of host publication	2008 International Conference on Innovations in Information Technology, IIT 2008
Publisher	IEEE Computer Society
Pages	6-10
Number of pages	5
ISBN (Print)	9781424433971
DOIs	https://doi.org/10.1109/INNOVATIONS.2008.4781764
Publication status	Published - Jan 1 2008
Event	2008 International Conference on Innovations in Information Technology, IIT 2008 - Al Ain, United Arab Emirates Duration: Dec 16 2008 → Dec 18 2008

Publication series

Name	2008 International Conference on Innovations in Information Technology, IIT 2008

Other

Other	2008 International Conference on Innovations in Information Technology, IIT 2008
Country/Territory	United Arab Emirates
City	Al Ain
Period	12/16/08 → 12/18/08

ASJC Scopus subject areas

Computer Science Applications
Information Systems
Software

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10.1109/INNOVATIONS.2008.4781764

Cite this

Badidi, E., Esmahi, L., Serhani, M. A., & Bouktif, S. (2008). A web services based framework for uniform integration of command-line bioinformatics software tools. In 2008 International Conference on Innovations in Information Technology, IIT 2008 (pp. 6-10). Article 4781764 (2008 International Conference on Innovations in Information Technology, IIT 2008). IEEE Computer Society. https://doi.org/10.1109/INNOVATIONS.2008.4781764

A web services based framework for uniform integration of command-line bioinformatics software tools. / Badidi, Elarbi; Esmahi, Larbi; Serhani, M. Adel et al.
2008 International Conference on Innovations in Information Technology, IIT 2008. IEEE Computer Society, 2008. p. 6-10 4781764 (2008 International Conference on Innovations in Information Technology, IIT 2008).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Badidi, E, Esmahi, L, Serhani, MA & Bouktif, S 2008, A web services based framework for uniform integration of command-line bioinformatics software tools. in 2008 International Conference on Innovations in Information Technology, IIT 2008., 4781764, 2008 International Conference on Innovations in Information Technology, IIT 2008, IEEE Computer Society, pp. 6-10, 2008 International Conference on Innovations in Information Technology, IIT 2008, Al Ain, United Arab Emirates, 12/16/08. https://doi.org/10.1109/INNOVATIONS.2008.4781764

Badidi E, Esmahi L, Serhani MA, Bouktif S. A web services based framework for uniform integration of command-line bioinformatics software tools. In 2008 International Conference on Innovations in Information Technology, IIT 2008. IEEE Computer Society. 2008. p. 6-10. 4781764. (2008 International Conference on Innovations in Information Technology, IIT 2008). doi: 10.1109/INNOVATIONS.2008.4781764

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A web services based framework for uniform integration of command-line bioinformatics software tools

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