TY - JOUR
T1 - Genomic analysis of Meckel-Gruber syndrome in Arabs reveals marked genetic heterogeneity and novel candidate genes
AU - Shaheen, Ranad
AU - Faqeih, Eissa
AU - Alshammari, Muneera J.
AU - Swaid, Abdulrahman
AU - Al-Gazali, Lihadh
AU - Mardawi, Elham
AU - Ansari, Shinu
AU - Sogaty, Sameera
AU - Seidahmed, Mohammed Z.
AU - Almotairi, Muhammed I.
AU - Farra, Chantal
AU - Kurdi, Wesam
AU - Al-Rasheed, Shatha
AU - Alkuraya, Fowzan S.
N1 - Funding Information:
We thank the study families for their enthusiastic participation. We thank Dr Mohammed Al-Balawi for his help in extracting and storing DNA samples. We also thank the Genomic and Sequencing Core Facilities at KFSHRC for their technical help. This study was funded in part by KACST Grant 09-MED941-20 (FSA) and DHFMR Collaborative Research Grant (FSA).
PY - 2013/7
Y1 - 2013/7
N2 - Meckel-Gruber syndrome (MKS, OMIM #249000) is a multiple congenital malformation syndrome that represents the severe end of the ciliopathy phenotypic spectrum. Despite the relatively common occurrence of this syndrome among Arabs, little is known about its genetic architecture in this population. This is a series of 18 Arab families with MKS, who were evaluated clinically and studied using autozygome-guided mutation analysis and exome sequencing. We show that autozygome-guided candidate gene analysis identified the underlying mutation in the majority (n=12, 71%). Exome sequencing revealed a likely pathogenic mutation in three novel candidate MKS disease genes. These include C5orf42, Ellis-van-Creveld disease gene EVC2 and SEC8 (also known as EXOC4), which encodes an exocyst protein with an established role in ciliogenesis. This is the largest and most comprehensive genomic study on MKS in Arabs and the results, in addition to revealing genetic and allelic heterogeneity, suggest that previously reported disease genes and the novel candidates uncovered by this study account for the overwhelming majority of MKS patients in our population.
AB - Meckel-Gruber syndrome (MKS, OMIM #249000) is a multiple congenital malformation syndrome that represents the severe end of the ciliopathy phenotypic spectrum. Despite the relatively common occurrence of this syndrome among Arabs, little is known about its genetic architecture in this population. This is a series of 18 Arab families with MKS, who were evaluated clinically and studied using autozygome-guided mutation analysis and exome sequencing. We show that autozygome-guided candidate gene analysis identified the underlying mutation in the majority (n=12, 71%). Exome sequencing revealed a likely pathogenic mutation in three novel candidate MKS disease genes. These include C5orf42, Ellis-van-Creveld disease gene EVC2 and SEC8 (also known as EXOC4), which encodes an exocyst protein with an established role in ciliogenesis. This is the largest and most comprehensive genomic study on MKS in Arabs and the results, in addition to revealing genetic and allelic heterogeneity, suggest that previously reported disease genes and the novel candidates uncovered by this study account for the overwhelming majority of MKS patients in our population.
KW - EVC2
KW - EXOC4
KW - autozygome
KW - ciliopathy
KW - encephalocele
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U2 - 10.1038/ejhg.2012.254
DO - 10.1038/ejhg.2012.254
M3 - Article
C2 - 23169490
AN - SCOPUS:84879414293
SN - 1018-4813
VL - 21
SP - 762
EP - 768
JO - European Journal of Human Genetics
JF - European Journal of Human Genetics
IS - 7
ER -