TY - CHAP
T1 - Missing-Values Imputation Algorithms for Microarray Gene Expression Data
AU - Moorthy, Kohbalan
AU - Jaber, Aws Naser
AU - Ismail, Mohd Arfian
AU - Ernawan, Ferda
AU - Mohamad, Mohd Saberi
AU - Deris, Safaai
N1 - Publisher Copyright:
© 2019, Springer Science+Business Media, LLC, part of Springer Nature.
PY - 2019
Y1 - 2019
N2 - In gene expression studies, missing values are a common problem with important consequences for the interpretation of the final data (Satija et al., Nat Biotechnol 33(5):495, 2015). Numerous bioinformatics examination tools are used for cancer prediction, including the data set matrix (Bailey et al., Cell 173(2):371–385, 2018); thus, it is necessary to resolve the problem of missing-values imputation. This chapter presents a review of the research on missing-values imputation approaches for gene expression data. By using local and global correlation of the data, we were able to focus mostly on the differences between the algorithms. We classified the algorithms as global, hybrid, local, or knowledge-based techniques. Additionally, this chapter presents suitable assessments of the different approaches. The purpose of this review is to focus on developments in the current techniques for scientists rather than applying different or newly developed algorithms with identical functional goals. The aim was to adapt the algorithms to the characteristics of the data.
AB - In gene expression studies, missing values are a common problem with important consequences for the interpretation of the final data (Satija et al., Nat Biotechnol 33(5):495, 2015). Numerous bioinformatics examination tools are used for cancer prediction, including the data set matrix (Bailey et al., Cell 173(2):371–385, 2018); thus, it is necessary to resolve the problem of missing-values imputation. This chapter presents a review of the research on missing-values imputation approaches for gene expression data. By using local and global correlation of the data, we were able to focus mostly on the differences between the algorithms. We classified the algorithms as global, hybrid, local, or knowledge-based techniques. Additionally, this chapter presents suitable assessments of the different approaches. The purpose of this review is to focus on developments in the current techniques for scientists rather than applying different or newly developed algorithms with identical functional goals. The aim was to adapt the algorithms to the characteristics of the data.
KW - Cancer Informatics
KW - Computational intelligence
KW - Gene expression data
KW - Microarray
KW - Missing-values imputation
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U2 - 10.1007/978-1-4939-9442-7_12
DO - 10.1007/978-1-4939-9442-7_12
M3 - Chapter
C2 - 31115893
AN - SCOPUS:85066293977
T3 - Methods in Molecular Biology
SP - 255
EP - 266
BT - Methods in Molecular Biology
PB - Humana Press Inc.
ER -