New algorithms for processing time-series big EEG data within mobile health monitoring systems

Mohamed Adel Serhani, Mohamed El Menshawy, Abdelghani Benharref, Saad Harous, Alramzana Nujum Navaz

Research output: Contribution to journalArticlepeer-review

16 Citations (Scopus)

Abstract

Background and objectives Recent advances in miniature biomedical sensors, mobile smartphones, wireless communications, and distributed computing technologies provide promising techniques for developing mobile health systems. Such systems are capable of monitoring epileptic seizures reliably, which are classified as chronic diseases. Three challenging issues raised in this context with regard to the transformation, compression, storage, and visualization of big data, which results from a continuous recording of epileptic seizures using mobile devices. Methods In this paper, we address the above challenges by developing three new algorithms to process and analyze big electroencephalography data in a rigorous and efficient manner. The first algorithm is responsible for transforming the standard European Data Format (EDF) into the standard JavaScript Object Notation (JSON) and compressing the transformed JSON data to decrease the size and time through the transfer process and to increase the network transfer rate. The second algorithm focuses on collecting and storing the compressed files generated by the transformation and compression algorithm. The collection process is performed with respect to the on-the-fly technique after decompressing files. The third algorithm provides relevant real-time interaction with signal data by prospective users. It particularly features the following capabilities: visualization of single or multiple signal channels on a smartphone device and query data segments. Results We tested and evaluated the effectiveness of our approach through a software architecture model implementing a mobile health system to monitor epileptic seizures. The experimental findings from 45 experiments are promising and efficiently satisfy the approach's objectives in a price of linearity. Moreover, the size of compressed JSON files and transfer times are reduced by 10% and 20%, respectively, while the average total time is remarkably reduced by 67% through all performed experiments. Conclusions Our approach successfully develops efficient algorithms in terms of processing time, memory usage, and energy consumption while maintaining a high scalability of the proposed solution. Our approach efficiently supports data partitioning and parallelism relying on the MapReduce platform, which can help in monitoring and automatic detection of epileptic seizures.

Original languageEnglish
Pages (from-to)79-94
Number of pages16
JournalComputer Methods and Programs in Biomedicine
Volume149
DOIs
Publication statusPublished - Oct 2017

Keywords

  • Big data
  • EEG
  • Epileptic seizure
  • Mapreduce
  • Mobile monitoring

ASJC Scopus subject areas

  • Software
  • Computer Science Applications
  • Health Informatics

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