Parameter estimation for simulation of glycolysis pathway by using an improved differential evolution

Chuii Khim Chong; Mohd Saberi Mohamad; Safaai Deris; Yee Wen Choon; Lian En Chai

doi:10.1007/978-3-642-32826-8_37

Parameter estimation for simulation of glycolysis pathway by using an improved differential evolution

Chuii Khim Chong, Mohd Saberi Mohamad, Safaai Deris, Yee Wen Choon, Lian En Chai

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Abstract

An improved differential evolution (DE) algorithm is proposed in this paper to optimize its performance in estimating the germane parameters for metabolic pathway data to simulate glycolysis pathway for Saccharomyces cerevisiae. This study presents an improved algorithm of parameter sensitivity test into the process of DE algorithm. The result of the improved algorithm is testifying to be supreme to the others estimation algorithms. The outcomes from this study promote estimating optimal kinetic parameters, shorter computation time and ameliorating the precision of simulated kinetic model for the experimental data.

Original language	English
Title of host publication	Knowledge Technology - Third Knowledge Technology Week, KTW 2011, Revised Selected Papers
Pages	352-355
Number of pages	4
DOIs	https://doi.org/10.1007/978-3-642-32826-8_37
Publication status	Published - 2012
Externally published	Yes
Event	3rd Knowledge Technology Week, KTW 2011 - Kajang, Malaysia Duration: Jul 18 2011 → Jul 22 2011

Publication series

Name	Communications in Computer and Information Science
Volume	295 CCIS
ISSN (Print)	1865-0929

Conference

Conference	3rd Knowledge Technology Week, KTW 2011
Country/Territory	Malaysia
City	Kajang
Period	7/18/11 → 7/22/11

Keywords

Differential Evolution
Evolutionary Algorithm
Metabolic Engineering
Optimization
Parameter Estimation

ASJC Scopus subject areas

General Computer Science
General Mathematics

Access to Document

10.1007/978-3-642-32826-8_37

Cite this

Chong, C. K., Mohamad, M. S., Deris, S., Choon, Y. W., & Chai, L. E. (2012). Parameter estimation for simulation of glycolysis pathway by using an improved differential evolution. In Knowledge Technology - Third Knowledge Technology Week, KTW 2011, Revised Selected Papers (pp. 352-355). (Communications in Computer and Information Science; Vol. 295 CCIS). https://doi.org/10.1007/978-3-642-32826-8_37

Parameter estimation for simulation of glycolysis pathway by using an improved differential evolution. / Chong, Chuii Khim; Mohamad, Mohd Saberi; Deris, Safaai et al.
Knowledge Technology - Third Knowledge Technology Week, KTW 2011, Revised Selected Papers. 2012. p. 352-355 (Communications in Computer and Information Science; Vol. 295 CCIS).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Chong, CK, Mohamad, MS, Deris, S, Choon, YW & Chai, LE 2012, Parameter estimation for simulation of glycolysis pathway by using an improved differential evolution. in Knowledge Technology - Third Knowledge Technology Week, KTW 2011, Revised Selected Papers. Communications in Computer and Information Science, vol. 295 CCIS, pp. 352-355, 3rd Knowledge Technology Week, KTW 2011, Kajang, Malaysia, 7/18/11. https://doi.org/10.1007/978-3-642-32826-8_37

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Parameter estimation for simulation of glycolysis pathway by using an improved differential evolution

Abstract

Publication series

Conference

Keywords

ASJC Scopus subject areas

Access to Document

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Cite this