TY - GEN
T1 - Tubular Structure-Aware Convolutional Neural Networks for Organ at Risks Segmentation in Cervical Cancer Radiotherapy
AU - Wu, Xinran
AU - Cui, Ming
AU - Gao, Yuhua
AU - Sun, Deyu
AU - Ma, He
AU - Zhang, Erlei
AU - Xie, Yaoqin
AU - Zaki, Nazar
AU - Qin, Wenjian
N1 - Funding Information:
Foundation of China (No. 61901463 and U20A20373), and the Shenzhen Science and Technology Program of China grant JCYJ20200109115420720, and the Youth Innovation Promotion Association CAS(2022365). The authors would like to acknowledge support from the Big Data Analytics Center (BIDAC) at the United Arab Emirates University (UAEU).
Funding Information:
Acknowledgements. This work was supported by the National Natural Science
Publisher Copyright:
© 2022, The Author(s), under exclusive license to Springer Nature Switzerland AG.
PY - 2022
Y1 - 2022
N2 - Cervical cancer is the most frequent cancer type among women worldwide and radiotherapy is the major clinical treatment. Organs in the radiation field are called Organ at Risks (OARs), which are prone to irreversible damage during radiotherapy. Therefore, accurate delineation of OARs is a critical step in ensuring radiotherapy dosimetry accuracy. However, currently existing deep learning-based cervical cancer OARs segmentation methods do not make full advantage of anatomical information. In this paper, we develop a novel tubular structure-aware deep convolutional network method integrating the tubular anatomical morphological features into a model for colon, small intestine and rectum in cervical cancer OARs. Firstly, a tubular filter based on variable annular Gaussian kernel and gradient detection was used to produce the tubular feature map. Secondary, tubular feature map concatenated with original image was input into the nnU-Net network for anatomical morphological information learning. Finally, we evaluated our proposed method on the clinical collection datasets with brachytherapy. Compared to the baseline model and state-of-the-art model, DSC and Recall were improved and the relative volume error (RVE) was reduced for the OARs with a tubular shape.
AB - Cervical cancer is the most frequent cancer type among women worldwide and radiotherapy is the major clinical treatment. Organs in the radiation field are called Organ at Risks (OARs), which are prone to irreversible damage during radiotherapy. Therefore, accurate delineation of OARs is a critical step in ensuring radiotherapy dosimetry accuracy. However, currently existing deep learning-based cervical cancer OARs segmentation methods do not make full advantage of anatomical information. In this paper, we develop a novel tubular structure-aware deep convolutional network method integrating the tubular anatomical morphological features into a model for colon, small intestine and rectum in cervical cancer OARs. Firstly, a tubular filter based on variable annular Gaussian kernel and gradient detection was used to produce the tubular feature map. Secondary, tubular feature map concatenated with original image was input into the nnU-Net network for anatomical morphological information learning. Finally, we evaluated our proposed method on the clinical collection datasets with brachytherapy. Compared to the baseline model and state-of-the-art model, DSC and Recall were improved and the relative volume error (RVE) was reduced for the OARs with a tubular shape.
KW - Anatomical information
KW - Cervical cancer organ at risk
KW - Tubular filter
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U2 - 10.1007/978-3-031-17266-3_13
DO - 10.1007/978-3-031-17266-3_13
M3 - Conference contribution
AN - SCOPUS:85140449718
SN - 9783031172656
T3 - Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
SP - 131
EP - 140
BT - Computational Mathematics Modeling in Cancer Analysis - 1st International Workshop, CMMCA 2022, Held in Conjunction with MICCAI 2022, Proceedings
A2 - Qin, Wenjian
A2 - Zaki, Nazar
A2 - Zhang, Fa
A2 - Wu, Jia
A2 - Yang, Fan
PB - Springer Science and Business Media Deutschland GmbH
T2 - 1st International Workshop on Computational Mathematics Modeling in Cancer Analysis, CMMCA 2022, held in conjunction with the 25th International Conference on Medical Image Computing and Computer Assisted Intervention, MICCAI 2022
Y2 - 18 September 2022 through 18 September 2022
ER -